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Dissipative particle dynamics : ウィキペディア英語版
Dissipative particle dynamics
Dissipative particle dynamics (DPD) is a stochastic simulation technique for simulating the dynamic and rheological properties of simple and complex fluids. It was initially devised by Hoogerbrugge and Koelman 〔P. J. Hoogerbrugge and J. M. V. A. Koelman. Simulating microscopic hydrodynamic phenomena with dissipative particle dynamics. Europhysics Letters, 19(3):155–160, JUN 1 1992〕〔J. M. V. A. Koelman and P. J. Hoogerbrugge. Dynamic simulations of hard-sphere suspensions under steady shear. Europhysics Letters, 21(3):363–368, JAN 20 1993〕 to avoid the lattice artifacts of the so-called lattice gas automata and to tackle hydrodynamic time and space scales beyond those available with molecular dynamics (MD). It was subsequently reformulated and slightly modified by P. Español 〔P. Español and P. B. Warren. Statistical-mechanics of dissipative particle dynamics. Europhysics Letters, 30(4):191–196, MAY 1 1995〕 to ensure the proper thermal equilibrium state. A series of new DPD algorithms with reduced computational complexity and better control of transport properties are presented.〔(N. Goga, A.J. Rzepiela, A.H. de Vries, S.J. Marrink, H.J.C. Berendsen: Efficient algorithms for Langevin and DPD dynamics, J. Chem. Th. Comp., 2012, DOI:10.1021/ct3000876 )〕 The algorithms presented in this article choose randomly a pair particle for applying DPD thermostating thus reducing the computational complexity.
DPD is an off-lattice mesoscopic simulation technique which involves a set of particles moving in continuous space and discrete time. Particles represent whole molecules or fluid regions, rather than single atoms, and atomistic details are not considered relevant to the processes addressed. The particles’ internal degrees of freedom are integrated out and replaced by simplified pairwise dissipative and random forces, so as to conserve momentum locally and ensure correct hydrodynamic behaviour. The main advantage of this method is that it gives access to longer time and length scales than are possible using conventional MD simulations. Simulations of polymeric fluids in volumes up to 100 nm in linear dimension for tens of microseconds are now common.
==Equations==
The total non-bonded force acting on a DPD particle ''i'' is given by a sum over all particles ''j'' that lie within a fixed cut-off distance, of three pairwise-additive forces:
: f_i =\sum_(F^C_ + F^D_ + F^R_)
where the first term in the above equation is a conservative force, the second a
dissipative force and the third a random force. The conservative force acts to give beads a chemical identity, while the dissipative and random forces together form a thermostat that keeps the mean temperature of the system constant. A key property of all of the non-bonded forces is that they conserve momentum locally, so that hydrodynamic modes of the fluid emerge even for small particle numbers. Local momentum conservation requires that the random force between two interacting beads be antisymmetric. Each pair of interacting particles therefore requires only a single random force calculation. This distinguishes DPD from Brownian dynamics in which each particle experiences a random force independently of all other particles. Beads can be connected into ‘molecules’ by tying them together with soft (often Hookean) springs. The most common applications of DPD keep the particle number, volume and temperature constant, and so take place in the NVT ensemble. Alternatively, the pressure instead of the volume is held constant, so that the simulation is in the NPT ensemble.

抄文引用元・出典: フリー百科事典『 ウィキペディア(Wikipedia)
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